BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G04SP1|AL428268
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig822 980 0.0
3x_Contig921 613 e-175
>3x_Contig822
Length = 2481
Score = 980 bits (494), Expect = 0.0
Identities = 523/528 (99%), Gaps = 4/528 (0%)
Strand = Plus / Minus
Query: 448 ttcttttggaaatgcgca-cccatccttctagagctccccg-ctcttgctcgtttaagtc 505
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2481 ttcttttggaaatgcgcagcccatccttctagagctccccggctcttgctcgtttaagtc 2422
Query: 506 ctggagagtatctataggttggtcccagtgtcttactgtatccaaatcaaatgagtttgt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 ctggagagtatctataggttggtcccagtgtcttactgtatccaaatcaaatgagtttgt 2362
Query: 566 agcaagtcctctggatgcatcatgtccagcaaaattagagtatggtccgctaggcccgta 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 agcaagtcctctggatgcatcatgtccagcaaaattagagtatggtccgctaggcccgta 2302
Query: 626 aaattgtcttccttggctgcagtcgtacacttt-ccccaaaactgcgataaagatctttt 684
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2301 aaattgtcttccttggctgcagtcgtacactttcccccaaaactgcgataaagatctttt 2242
Query: 685 catcgtcatgtccattgaatttggatagcgttctgggataaaactttccttccacaattg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2241 catcgtcatgtccattgaatttggatagcgttctgggataaaactttccttccacaattg 2182
Query: 745 ggtcatttgacttagagctagcaccttcgttgccgctaccactttgcgtt-aaacccgtt 803
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2181 ggtcatttgacttagagctagcaccttcgttgccgctaccactttgcgttaaaacccgtt 2122
Query: 804 gggtcagctgtggtcttcacagcacctgtcaaaaagttcttaataaaagacatttgcttt 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2121 gggtcagctgtggtcttcacagcacctgtcaaaaagttcttaataaaagacatttgcttt 2062
Query: 864 aagattgagacttgattatcgaaactctatgttcagacttagttacaacaaaatcaacca 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 aagattgagacttgattatcgaaactctatgttcagacttagttacaacaaaatcaacca 2002
Query: 924 aatcgtaattgagagtytaatggtatatagataatatttccctctggg 971
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2001 aatcgtaattgagagtctaatggtatatagataatatttccctctggg 1954
>3x_Contig921
Length = 3599
Score = 613 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 1 gatccttatcaaaattcgaggcacacagttaggcaagaagtagcaaaacacgcagattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 gatccttatcaaaattcgaggcacacagttaggcaagaagtagcaaaacacgcagattta 3208
Query: 61 aaggtcaattattctgaacaaggaatcgtgaaaactgtcgacataccgtgctgttacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3209 aaggtcaattattctgaacaaggaatcgtgaaaactgtcgacataccgtgctgttacaca 3268
Query: 121 gaagatccgaagttgattaatataggacaagagcacacttttagaatacgtgactatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3269 gaagatccgaagttgattaatataggacaagagcacacttttagaatacgtgactatcct 3328
Query: 181 tctttgaatcctagtcagcgaacgacgagaaatggtttcaggagtagaaatcagcctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3329 tctttgaatcctagtcagcgaacgacgagaaatggtttcaggagtagaaatcagcctgaa 3388
Query: 241 cctgtttcgcgcttcttctttgaggaagttgcagagaccatgtcctaatccatcatatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3389 cctgtttcgcgcttcttctttgaggaagttgcagagaccatgtcctaatccatcatatac 3448
Query: 301 agacatata 309
|||||||||
Sbjct: 3449 agacatata 3457
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6585
Number of Sequences: 1807
Number of extensions: 6585
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)